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Danio rerio

19 genes annotated in zebrafish

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embryonic camera type eye morphogenesis

GO:0048596

The process in which the anatomical structures of the eye are generated and organized during embryonic development.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "embryonic camera type eye morphogenesis"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "embryonic camera type eye morphogenesis" (in gray)

Name	Description	Probability	Func Analog Organism
tbx1	T-box 1	0.941
lhx2b	LIM homeobox 2b	0.919	Zebrafish
dharma	dharma	0.919
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.874
otx2	orthodenticle homolog 2	0.799
wnt8b	wingless-type MMTV integration site family, member 8b	0.742
ndr2	nodal-related 2	0.723
znf503	zinc finger protein 503	0.635
wnt2	wingless-type MMTV integration site family member 2	0.590	Zebrafish
wnt1	wingless-type MMTV integration site family, member 1	0.586	Zebrafish
hmx4	H6 family homeobox 4	0.583
boc	brother of CDO	0.580
pax2a	paired box gene 2a	0.564
sox2	SRY-box containing gene 2	0.561
bmp4	bone morphogenetic protein 4	0.558
foxa2	forkhead box A2	0.546
fezf2	FEZ family zinc finger 2	0.533
lhx5	LIM homeobox 5	0.529	Zebrafish
wnt5b	wingless-type MMTV integration site family, member 5b	0.528	Zebrafish
dlx2a	distal-less homeobox gene 2a	0.507
six3b	sine oculis homeobox homolog 3b	0.486
eya1	eyes absent homolog 1	0.477
rx2	retinal homeobox gene 2	0.473	Zebrafish
mab21l2	mab-21-like 2	0.443
fgf3	fibroblast growth factor 3	0.433
flh	floating head	0.428
fgf17	fibroblast growth factor 17	0.419
vsx1	visual system homeobox 1 homolog, chx10-like	0.419
tcf7l2	transcription factor 7-like 2 (T-cell specific, HMG-box)	0.407	Zebrafish
vax1	ventral anterior homeobox 1	0.393
barhl2	BarH-like 2	0.390
wnt2bb	wingless-type MMTV integration site family, member 2Bb	0.347	Zebrafish
nkx2.1a	NK2 homeobox 1a	0.338
wnt3	wingless-type MMTV integration site family, member 3	0.321	Zebrafish
dlx3b	distal-less homeobox gene 3b	0.318
lhx1b	LIM homeobox 1b	0.316	Zebrafish
vax2	ventral anterior homeobox 2	0.301
gli1	GLI-Kruppel family member 1	0.299
dla	deltaA	0.295
six2a	sine oculis-related homeobox 2a	0.292	Zebrafish
atoh7	atonal homolog 7	0.290
shhb	sonic hedgehog b	0.284
dkk1b	dickkopf 1b	0.256
gbx2	gastrulation brain homeo box 2	0.253
dlx4a	distal-less homeobox gene 4a	0.252
zic2a	zic family member 2 (odd-paired homolog, Drosophila), a	0.240
frzb	frizzled-related protein	0.227	Zebrafish
runx3	runt-related transcription factor 3	0.224
tcf7	transcription factor 7 (T-cell specific, HMG-box)	0.223	Zebrafish
dlx4b	distal-less homeobox gene 4b	0.218
epb4.1l4	erythrocyte protein band 4.1-like 4	0.199
otx1a	orthodenticle homolog 1a	0.194
shha	sonic hedgehog a	0.192
pomca	proopiomelanocortin a	0.188
spaw	southpaw	0.180
ephb3a	eph receptor B3a	0.180
grem2	gremlin 2, cysteine knot superfamily	0.176
dlx2b	distal-less homeobox gene 2b	0.171
zic3	zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila)	0.161
nkx2.2a	NK2 transcription factor related 2a	0.156
gata3	GATA-binding protein 3	0.155
dlx1a	distal-less homeobox gene 1a	0.154
wnt10b	wingless-type MMTV integration site family, member 10b	0.153	Zebrafish
fzd8b	frizzled homolog 8b	0.152	Zebrafish
lmo4a	LIM domain only 4a	0.151
lft2	lefty2	0.140
foxn4	forkhead box N4	0.140
ascl1a	achaete-scute complex-like 1a (Drosophila)	0.139
twist3	twist3	0.137
isl1	islet1	0.134	Zebrafish
tbx5a	T-box 5a	0.133
tp63	tumor protein p63	0.133
cdh2	cadherin 2, neuronal	0.129
rx3	retinal homeobox gene 3	0.127
zic1	zic family member 1 (odd-paired homolog, Drosophila)	0.125
fzd7a	frizzled homolog 7a	0.123
pax8	paired box gene 8	0.122	Zebrafish
nkx1.2la	NK1 transcription factor related 2-like,a	0.112
chrna2a	cholinergic receptor, nicotinic, alpha polypeptide 2a (neuronal)	0.112
neurod4	neurogenic differentiation 4	0.110
bmp2b	bone morphogenetic protein 2b	0.109
sim1a	single-minded homolog 1a (Drosophila)	0.109
bmp2a	bone morphogenetic protein 2a	0.109
epha4b	eph receptor A4b	0.108
alpi	alkaline phosphatase, intestinal	0.107
eng2a	engrailed 2a	0.107
fgf4	fibroblast growth factor 4	0.104
six4a	sine oculis homeobox homolog 4a	0.104
fzd10	frizzled homolog 10	0.101	Zebrafish
wnt11	wingless-type MMTV integration site family, member 11	0.101
fgf10a	fibroblast growth factor 10a	0.099
alcama	activated leukocyte cell adhesion molecule a	0.099
gli2b	GLI-Kruppel family member GLI2b	0.098
sox1a	SRY-box containing gene 1a	0.098
nkx3.2	NK3 homeobox 2	0.097
sfrp1a	secreted frizzled-related protein 1a	0.096
sp5l	Sp5 transcription factor-like	0.096
her3	hairy-related 3	0.096
dmbx1a	diencephalon/mesencephalon homeobox 1a	0.094
dbx1a	developing brain homeobox 1a	0.091
rarga	retinoic acid receptor gamma a	0.091
foxg1a	forkhead box G1a	0.090
pax6a	paired box gene 6a	0.090	Mouse
foxa1	forkhead box A1	0.087
sim2	single-minded homolog 2 (Drosophila)	0.087
six4b	sine oculis homeobox homolog 4b	0.083	Zebrafish
foxi1	forkhead box I1	0.082
hmx1	H6 homeo box 1	0.081
snai1b	snail homolog 1b (Drosophila)	0.080
ephb4b	eph receptor B4b	0.080
otx1b	orthodenticle homolog 1b	0.079
pitx3	paired-like homeodomain transcription factor 3	0.079	Zebrafish
six3a	sine oculis homeobox homolog 3a	0.078	Zebrafish
si:ch211-173o4.2	si:ch211-173o4.2	0.077
tlx2	T-cell leukemia, homeobox 2	0.077
sulf1	sulfatase 1	0.074
hnf1ba	HNF1 homeobox Ba	0.073
notch2	notch homolog 2	0.073
bambib	BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b	0.069
irx1b	iroquois homeobox protein 1, b	0.066
nr2e1	nuclear receptor subfamily 2, group E, member 1	0.066
sp7	Sp7 transcription factor	0.063
admp	anti-dorsalizing morphogenic protein	0.063
oprm1	opioid receptor, mu 1	0.062
hesx1	homeo box (expressed in ES cells) 1	0.062	Zebrafish
irx1a	iroquois homeobox protein 1, a	0.061
hmgcrb	3-hydroxy-3-methylglutaryl-Coenzyme A reductase b	0.061
gata4	GATA-binding protein 4	0.059
atoh1a	atonal homolog 1a	0.059
lox	lysyl oxidase	0.057
lamb1a	laminin, beta 1a	0.057
tbx2b	T-box 2b	0.056
robo3	roundabout homolog 3	0.056
sfrp5	secreted frizzled-related protein 5	0.055
zic5	zic family member 5 (odd-paired homolog, Drosophila)	0.054
wnt11r	wingless-type MMTV integration site family, member 11, related	0.054	Zebrafish
wnt3a	wingless-type MMTV integration site family, member 3A	0.054	Zebrafish
runx2b	runt-related transcription factor 2b	0.053
mxtx2	mix-type homeobox gene 2	0.052
hoxc4a	homeo box C4a	0.052
ecm2	extracellular matrix protein 2, female organ and adipocyte specific	0.050
dbh	dopamine beta hydroxylase	0.050
gdf6b	growth differentiation factor 6b	0.049
vsx2	visual system homeobox 2	0.049
wnt9b	wingless-type MMTV integration site family, member 9B	0.048	Zebrafish
foxd3	forkhead box D3	0.048
tfap2c	transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)	0.047
dld	deltaD	0.047
axin2	axin 2 (conductin, axil)	0.046
fgf8b	fibroblast growth factor 8 b	0.046
pmp22a	peripheral myelin protein 22a	0.046
dlx5a	distal-less homeobox gene 5a	0.045
emx1	empty spiracles homeobox 1	0.045
igfbp3	insulin-like growth factor binding protein 3	0.044
runx2a	runt-related transcription factor 2a	0.044
inab	internexin neuronal intermediate filament protein, alpha b	0.044
rest	RE1-silencing transcription factor	0.043
nkx2.1b	NK2 homeobox 1b	0.043
wnt16	wingless-type MMTV integration site family, member 16	0.042
lhx6	LIM homeobox 6	0.041	Zebrafish
pax9	paired box gene 9	0.041	Zebrafish
spon2a	spondin 2a, extracellular matrix protein	0.041
pea3	ETS-domain transcription factor pea3	0.041
her5	hairy-related 5	0.041
pou3f3a	POU class 3 homeobox 3a	0.040
cyp26c1	cytochrome P450, family 26, subfamily C, polypeptide 1	0.040
gbx1	gastrulation brain homeobox 1	0.040
fzd5	frizzled homolog 5	0.039	Zebrafish
oprd1b	opioid receptor, delta 1b	0.039
fn1	fibronectin 1	0.038
plagl2	pleiomorphic adenoma gene-like 2	0.038
nkx2.3	NK2 transcription factor related 3	0.037
irx7	iroquois homeobox protein 7	0.037
axin1	axin 1	0.037
wnt4a	wingless-type MMTV integration site family, member 4a	0.037	Zebrafish
mapk8b	mitogen-activated protein kinase 8b	0.036
lef1	lymphocyte enhancer binding factor 1	0.036	Zebrafish
bmpr1aa	bone morphogenetic protein receptor, type 1aa	0.036
dact1	dapper homolog 1, antagonist of beta-catenin (xenopus)	0.036
wif1	wnt inhibitory factor 1	0.035
lmx1b.2	LIM homeobox transcription factor 1, beta 2	0.035
rab28	RAB28, member RAS oncogene family	0.035
arx	aristaless related homeobox	0.035
mmp14a	matrix metalloproteinase 14a (membrane-inserted)	0.034
map2k4a	mitogen-activated protein kinase kinase 4a	0.034
hoxd4a	homeo box D4a	0.034
tgfb2	transforming growth factor, beta 2	0.034
chd	chordin	0.034
lhfp	lipoma HMGIC fusion partner	0.033
otx5	orthodenticle homolog 5	0.033
jag2	jagged 2	0.033
nr2e3	nuclear receptor subfamily 2, group E, member 3	0.032
pcdh18a	protocadherin 18a	0.031
isl2a	islet2a	0.031	Zebrafish
foxp2	forkhead box P2	0.030
smad9	MAD homolog 9 (Drosophila)	0.030
zfyve26	zinc finger, FYVE domain containing 26	0.030
smad7	MAD, mothers against decapentaplegic homolog 7 (Drosophila)	0.030
lft1	lefty1	0.030
map2k4b	mitogen-activated protein kinase kinase 4b	0.029
wnt10a	wingless-type MMTV integration site family, member 10a	0.029	Zebrafish
tfap2a	transcription factor AP-2 alpha	0.029	Mouse
tshb	thyroid stimulating hormone, beta subunit	0.029
sox32	SRY-box containing gene 32	0.029
irx5a	iroquois homeobox protein 5a	0.028
tal2	T-cell acute lymphocytic leukemia 2	0.028
lmo3	LIM domain only 3	0.028
efna3b	ephrin A3b	0.028
bhlhe22	basic helix-loop-helix family, member e22	0.027
nrxn2a	neurexin 2a	0.027
ctnnb1	catenin (cadherin-associated protein), beta 1	0.027
fgfr4	fibroblast growth factor receptor 4	0.027
robo1	roundabout homolog 1	0.026
sox17	SRY-box containing gene 17	0.026
dlx6a	distal-less homeobox gene 6a	0.026
irx4b	iroquois homeobox protein 4b	0.025
hoxa1a	homeo box A1a	0.025
ntn1b	netrin 1b	0.025
olig2	oligodendrocyte lineage transcription factor 2	0.025
mib	mind bomb	0.025
hey1	hairy/enhancer-of-split related with YRPW motif 1	0.024
col11a1a	collagen, type XI, alpha 1a	0.024
neurog1	neurogenin 1	0.024
six6a	sine oculis-related homeobox 6a	0.024	Zebrafish
gata2a	GATA-binding protein 2a	0.024
wnt7ba	wingless-type MMTV integration site family, member 7Ba	0.024	Zebrafish
loxl2b	lysyl oxidase-like 2b	0.023
si:dkey-261h17.1	si:dkey-261h17.1	0.023
zbtb4	zinc finger and BTB domain containing 4	0.023
esrrgb	estrogen-related receptor gamma b	0.022
tcf12	transcription factor 12	0.022
pou1f1	POU domain, class 1, transcription factor 1	0.021
gyltl1b	glycosyltransferase-like 1b	0.021
crybb1	crystallin, beta B1	0.021
pax5	paired box gene 5	0.021	Zebrafish
col5a2l	collagen, type V, alpha 2-like	0.021
fgf19	fibroblast growth factor 19	0.021
hoxa5a	homeo box A5a	0.021
foxp1b	forkhead box P1b	0.021
fzd9b	frizzled homolog 9b	0.021	Zebrafish
im:7156396	im:7156396	0.021
fzd8a	frizzled homolog 8a	0.021
zgc:85975	zgc:85975	0.021
mmp2	matrix metalloproteinase 2	0.021
gdnf	glial cell derived neurotrophic factor	0.020
grhl2b	grainyhead-like 2b (Drosophila)	0.020
sox21b	SRY-box containing gene 21 b	0.020
pax6b	paired box gene 6b	0.020	Mouse
celsr2	cadherin, EGF LAG seven-pass G-type receptor 2 and cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)	0.020
tnc	tenascin C	0.020
twist1a	twist1a	0.019
ier5l	immediate early response 5-like	0.019
c8a	complement component 8, alpha polypeptide	0.019
notch1a	notch homolog 1a	0.019
klf4a	Kruppel-like transcription factor 4a	0.019
rx1	retinal homeobox gene 1	0.019	Zebrafish
angpt1	angiopoietin 1	0.019
hoxb5b	homeo box B5b	0.019
msxc	muscle segment homeobox C	0.019
lhx3	LIM homeobox 3	0.018
cdon	cell adhesion molecule-related/down-regulated by oncogenes	0.018
pitx2	paired-like homeodomain transcription factor 2	0.018
notch3	notch homolog 3	0.018
sp5	Sp5 transcription factor	0.018
tnfsf10l3	tumor necrosis factor (ligand) superfamily, member 10 like 3	0.018
fgfr1b	fibroblast growth factor receptor 1b	0.018
rgma	RGM domain family, member A	0.018
vcana	versican a	0.018
camkvb	CaM kinase-like vesicle-associated b	0.018
foxd5	forkhead box D5	0.018
evx1	even-skipped homeobox 1	0.017
cryaba	crystallin, alpha B, a	0.017
six1b	sine oculis homeobox homolog 1b	0.017	Zebrafish
sox3	SRY-box containing gene 3	0.017
yes1	v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1	0.017
spry1	sprouty homolog 1 (Drosophila)	0.017
mab21l1	mab-21-like 1	0.017
msxe	muscle segment homeobox E	0.017
znf703	zinc finger protein 703	0.017
lhx9	LIM homeobox 9	0.017	Zebrafish
spsb4a	splA/ryanodine receptor domain and SOCS box containing 4a	0.017
hoxb3a	homeo box B3a	0.017
mll	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	0.016
glcea	glucuronyl C5-epimerase a	0.016
gro2	groucho 2	0.016
unc5b	unc-5 homolog B (C. elegans)	0.016
gli3	GLI-Kruppel family member GLI3	0.016
irx4a	iroquois homeobox protein 4a	0.016
nkx2.2b	NK2 transcription factor related 2b	0.016
lhx1a	LIM homeobox 1a	0.016	Zebrafish
flrt3	fibronectin leucine rich transmembrane 3	0.016
prl	prolactin	0.016
map2k7	mitogen-activated protein kinase kinase 7	0.016
pcdh10b	protocadherin 10b	0.016
apc	adenomatosis polyposis coli	0.016
wnt9a	wingless-type MMTV integration site family, member 9A	0.016	Zebrafish
sox11a	SRY-box containing gene 11a	0.015
lmo4b	LIM domain only 4b	0.015
eng2b	engrailed 2b	0.015
nanos3	nanos homolog 3	0.015
LOC100000500	sclerostin-like	0.015
tbx15	T-box 15	0.015
her6	hairy-related 6	0.015
gngt2b	guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b	0.015
ism1	isthmin 1	0.015
si:ch211-173b8.2	si:ch211-173b8.2	0.015
itgb3b	integrin beta 3b	0.015
klf4	Kruppel-like factor 4	0.014
eya2	eyes absent homolog 2 (Drosophila)	0.014
nog1	noggin 1	0.014
bmper	BMP binding endothelial regulator	0.014
col27a1a	collagen, type XXVII, alpha 1a	0.014
cfdl	complement factor D (adipsin) like	0.014
LOC100002342	carboxypeptidase A6-like	0.014
si:dkeyp-81f3.1	si:dkeyp-81f3.1	0.014
siah1	seven in absentia homolog 1 (Drosophila)	0.014
serpinf1	serine (or cysteine) peptidase inhibitor, clade F, member 1	0.014
tbx4	T-box 4	0.014
dbx1b	developing brain homeobox 1b	0.014
lama5	laminin, alpha 5	0.014
efna5a	ephrin A5a	0.014
pdlim4	PDZ and LIM domain 4	0.013
pou4f2	POU domain, class 4, transcription factor 2	0.013
hnf4a	hepatocyte nuclear factor 4, alpha	0.013
emx3	empty spiracles homeobox 3	0.013
efnb1	ephrin B1	0.013
hoxd3a	homeo box D3a	0.013
tcf7l1a	transcription factor 7-like 1a (T-cell specific, HMG-box)	0.013
meis2.1	myeloid ecotropic viral integration site 2.1	0.013
pth2	parathyroid hormone 2	0.013
hoxb8a	homeo box B8a	0.013
lzts2a	leucine zipper, putative tumor suppressor 2a	0.013
robo2	roundabout homolog 2	0.013
wnt7bb	wingless-type MMTV integration site family, member 7Bb	0.013
lrp2	low density lipoprotein-related protein 2	0.013
barx1	BarH-like homeobox 1	0.013
npnt	nephronectin	0.012
col10a1	collagen, type X, alpha 1	0.012
barhl1.2	BarH-like 1.2	0.012
spns2	spinster homolog 2 (Drosophila)	0.012
tgif1	TGFB-induced factor homeobox 1	0.012
bmp5	bone morphogenetic protein 5	0.012
tph1b	tryptophan hydroxylase 1b	0.012
fyna	FYN oncogene related to SRC, FGR, YES a	0.012
rad54b	RAD54 homolog B (S. cerevisiae)	0.012
pax4	paired box 4	0.012
osr1	odd-skipped related 1 (Drosophila)	0.012
kop	askopos	0.012
hmx3	homeo box (H6 family) 3	0.012
ptf1a	pancreas specific transcription factor, 1a	0.012
otop1	otopetrin 1	0.012
spon2b	spondin 2b, extracellular matrix protein	0.012
itgav	integrin, alpha V	0.012
cyp19a1a	cytochrome P450, family 19, subfamily A, polypeptide 1a	0.012
pnx	posterior neuron-specific homeobox	0.012
skia	nuclear oncoprotein skia	0.012
zgc:65851	zgc:65851	0.012
hoxa2b	homeo box A2b	0.011
emx2	empty spiracles homeobox 2	0.011
angptl7	angiopoietin-like 7	0.011
pdgfaa	platelet-derived growth factor alpha a	0.011
hoxa13b	homeo box A13b	0.011
zfp36l1a	zinc finger protein 36, C3H type-like 1a	0.011
tp73	tumor protein p73	0.011
slit3	slit (Drosophila) homolog 3	0.011
rad21	RAD21 homolog (S. pombe)	0.011
gja3	gap junction protein, alpha 3	0.011
zgc:92715	zgc:92715	0.011
lmo1	LIM domain only 1	0.011
si:ch1073-351m12.1	si:ch1073-351m12.1	0.011
ssbp3b	single stranded DNA binding protein 3b	0.011
bmp16	bone morphogenetic protein 16	0.011
pbx4	pre-B-cell leukemia transcription factor 4	0.011
etv2	ets variant gene 2	0.011
hoxc13a	homeo box C13a	0.011
rargb	retinoic acid receptor, gamma b	0.011
fzd7b	frizzled homolog 7b	0.011	Zebrafish
si:dkey-273o13.1	si:dkey-273o13.1	0.011
ptges	prostaglandin E synthase	0.011
tbx3	T-box 3	0.011
pcdh8	protocadherin 8	0.011
fbxl14b	F-box and leucine-rich repeat protein 14b	0.011
fsta	follistatin a	0.011
bglap	bone gamma-carboxyglutamate (gla) protein	0.011
nrarpa	notch-regulated ankyrin repeat protein a	0.011
tln1	talin 1	0.011
crim1	cysteine rich transmembrane BMP regulator 1 (chordin like)	0.010
hoxa3a	homeo box A3a	0.010
hapln1a	hyaluronan and proteoglycan link protein 1a	0.010
stat1b	signal transducer and activator of transcription 1b	0.010
prrx1a	paired related homeobox 1a	0.010
cdh4	cadherin 4, retinal	0.010
mapk4	mitogen-activated protein kinase 4	0.010
im:7162646	im:7162646	0.010
cpa2	carboxypeptidase A2 (pancreatic)	0.010
postn	periostin, osteoblast specific factor	0.010
zgc:103750	zgc:103750	0.010
ldb2b	LIM-domain binding factor 2b	0.010
cbx2	chromobox homolog 2 (Drosophila Pc class)	0.010
satb2	SATB homeobox 2	0.010
hnf1bb	HNF1 homeobox Bb	0.010
cdh6	cadherin 6	0.010
rorca	RAR-related orphan receptor C a	0.010
wnt5a	wingless-type MMTV integration site family, member 5a	0.010	Zebrafish
nadl1.2	neural adhesion molecule L1.2	0.010